CDS

Accession Number TCMCG051C18451
gbkey CDS
Protein Id XP_002306925.1
Location join(24554145..24554147,24554221..24554319,24554404..24554454,24554689..24554862,24555190..24555249,24555387..24555428)
Gene LOC7477670
GeneID 7477670
Organism Populus trichocarpa

Protein

Length 142aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA17973
db_source XM_002306889.3
Definition AP-2 complex subunit sigma [Populus trichocarpa]

EGGNOG-MAPPER Annotation

COG_category U
Description Belongs to the adaptor complexes small subunit family
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko01001        [VIEW IN KEGG]
ko01009        [VIEW IN KEGG]
ko03036        [VIEW IN KEGG]
ko04131        [VIEW IN KEGG]
KEGG_ko ko:K11481        [VIEW IN KEGG]
ko:K11827        [VIEW IN KEGG]
EC 2.7.11.1        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko04114        [VIEW IN KEGG]
ko04144        [VIEW IN KEGG]
ko04721        [VIEW IN KEGG]
ko04914        [VIEW IN KEGG]
ko04961        [VIEW IN KEGG]
ko05016        [VIEW IN KEGG]
map04114        [VIEW IN KEGG]
map04144        [VIEW IN KEGG]
map04721        [VIEW IN KEGG]
map04914        [VIEW IN KEGG]
map04961        [VIEW IN KEGG]
map05016        [VIEW IN KEGG]
GOs GO:0002119        [VIEW IN EMBL-EBI]
GO:0002164        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0005215        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005628        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005886        [VIEW IN EMBL-EBI]
GO:0005905        [VIEW IN EMBL-EBI]
GO:0005933        [VIEW IN EMBL-EBI]
GO:0005935        [VIEW IN EMBL-EBI]
GO:0005938        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006886        [VIEW IN EMBL-EBI]
GO:0006897        [VIEW IN EMBL-EBI]
GO:0006898        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008104        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008565        [VIEW IN EMBL-EBI]
GO:0009653        [VIEW IN EMBL-EBI]
GO:0009790        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009792        [VIEW IN EMBL-EBI]
GO:0010171        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0012506        [VIEW IN EMBL-EBI]
GO:0015031        [VIEW IN EMBL-EBI]
GO:0015833        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016192        [VIEW IN EMBL-EBI]
GO:0030117        [VIEW IN EMBL-EBI]
GO:0030118        [VIEW IN EMBL-EBI]
GO:0030119        [VIEW IN EMBL-EBI]
GO:0030120        [VIEW IN EMBL-EBI]
GO:0030122        [VIEW IN EMBL-EBI]
GO:0030125        [VIEW IN EMBL-EBI]
GO:0030128        [VIEW IN EMBL-EBI]
GO:0030131        [VIEW IN EMBL-EBI]
GO:0030132        [VIEW IN EMBL-EBI]
GO:0030135        [VIEW IN EMBL-EBI]
GO:0030136        [VIEW IN EMBL-EBI]
GO:0030139        [VIEW IN EMBL-EBI]
GO:0030276        [VIEW IN EMBL-EBI]
GO:0030427        [VIEW IN EMBL-EBI]
GO:0030659        [VIEW IN EMBL-EBI]
GO:0030662        [VIEW IN EMBL-EBI]
GO:0030665        [VIEW IN EMBL-EBI]
GO:0030666        [VIEW IN EMBL-EBI]
GO:0030669        [VIEW IN EMBL-EBI]
GO:0031090        [VIEW IN EMBL-EBI]
GO:0031410        [VIEW IN EMBL-EBI]
GO:0031982        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0034613        [VIEW IN EMBL-EBI]
GO:0042763        [VIEW IN EMBL-EBI]
GO:0042764        [VIEW IN EMBL-EBI]
GO:0042886        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044425        [VIEW IN EMBL-EBI]
GO:0044433        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044459        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045184        [VIEW IN EMBL-EBI]
GO:0045334        [VIEW IN EMBL-EBI]
GO:0046907        [VIEW IN EMBL-EBI]
GO:0048475        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051649        [VIEW IN EMBL-EBI]
GO:0070727        [VIEW IN EMBL-EBI]
GO:0071702        [VIEW IN EMBL-EBI]
GO:0071705        [VIEW IN EMBL-EBI]
GO:0071944        [VIEW IN EMBL-EBI]
GO:0072583        [VIEW IN EMBL-EBI]
GO:0097708        [VIEW IN EMBL-EBI]
GO:0098588        [VIEW IN EMBL-EBI]
GO:0098657        [VIEW IN EMBL-EBI]
GO:0098796        [VIEW IN EMBL-EBI]
GO:0098797        [VIEW IN EMBL-EBI]
GO:0098805        [VIEW IN EMBL-EBI]
GO:0099568        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGATCCGGTTTATACTGCTGCAAAATAGACAAGGCAAGACTCGTCTCGCCAAATACTATGTTCCTCTCGAGGATTCCGAGAAGCACAAGGTCGAATACGAGGTTCATCGATTGGTTGTTAATAGAGATCCCAAATTCACGAATTTTGTTGAGTTTCGGACACACAAGGTCATATACAGGCGGTATGCTGGATTGTTTTTCGCACTGTGTGTCGACATAACGGATAATGAACTGGCTTATTTGGAGTGCATTCATTTATTTGTGGAGATATTGGATCATTTCTTTAGCAATGTGTGCGAGCTAGATTTGGTGTTTAACTTTCACAAGGTTTATCTGATACTTGATGAATTCATTCTTGCCGGGGAGCTTCAAGAAACAAGCAAGAGGGCAATCATAGAGAGAATGGGAGAGCTGGAGAAGCTGGAGTAA
Protein:  
MIRFILLQNRQGKTRLAKYYVPLEDSEKHKVEYEVHRLVVNRDPKFTNFVEFRTHKVIYRRYAGLFFALCVDITDNELAYLECIHLFVEILDHFFSNVCELDLVFNFHKVYLILDEFILAGELQETSKRAIIERMGELEKLE